Star YuLab-SMU / clusterProfiler ?? A universal enrichment tool for interpreting omics data R 958 246 Built by 0 stars today
Star joey711 / phyloseq phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page: R 566 186 Built by 1 star today
Star GreenleafLab / ArchR ArchR : Analysis of Regulatory Chromatin in R ( www.ArchRProject.com ) R 360 126 Built by 0 stars today
Star sqjin / CellChat R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data R 601 139 Built by 0 stars today
Star benjjneb / dada2 Accurate sample inference from amplicon data with single nucleotide resolution R 458 141 Built by 1 star today
Star broadinstitute / infercnv Inferring CNV from Single-Cell RNA-Seq R 520 159 Built by 1 star today
Star satijalab / seurat-wrappers Community-provided extensions to Seurat R 285 125 Built by 0 stars today
Sponsor Star paul-buerkner / brms brms R package for Bayesian generalized multivariate non-linear multilevel models using Stan R 1,245 176 Built by 0 stars today
Star vegandevs / vegan R package for community ecologists: popular ordination methods, ecological null models & diversity analysis R 433 95 Built by 0 stars today
Star stuart-lab / signac R toolkit for the analysis of single-cell chromatin data R 295 84 Built by 0 stars today